:mod:`neuron_morphology.pipeline._schemas`
==========================================

.. py:module:: neuron_morphology.pipeline._schemas


Module Contents
---------------

Classes
~~~~~~~

.. autoapisummary::

   neuron_morphology.pipeline._schemas.PathResolution
   neuron_morphology.pipeline._schemas.PrimaryBoundaries
   neuron_morphology.pipeline._schemas.S3LandingBucket
   neuron_morphology.pipeline._schemas.InputParameters



.. py:class:: PathResolution(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

   Bases: :class:`argschema.schemas.DefaultSchema`

   mm.Schema class with support for making fields default to
   values defined by that field's arguments.
















   ..
       !! processed by numpydoc !!

   .. attribute:: path
      

      

   .. attribute:: resolution
      

      


.. py:class:: PrimaryBoundaries(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

   Bases: :class:`argschema.schemas.DefaultSchema`

   mm.Schema class with support for making fields default to
   values defined by that field's arguments.
















   ..
       !! processed by numpydoc !!

   .. attribute:: Soma
      

      

   .. attribute:: White_Matter
      

      

   .. attribute:: Pia
      

      


.. py:class:: S3LandingBucket(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

   Bases: :class:`argschema.schemas.DefaultSchema`

   mm.Schema class with support for making fields default to
   values defined by that field's arguments.
















   ..
       !! processed by numpydoc !!

   .. attribute:: name
      

      

   .. attribute:: region
      

      

   .. attribute:: credentials_file
      

      


.. py:class:: InputParameters(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

   Bases: :class:`argschema.schemas.ArgSchema`

   The base marshmallow schema used by ArgSchemaParser to identify
   input_json and output_json files and the log_level
















   ..
       !! processed by numpydoc !!

   .. attribute:: destination_bucket
      

      

   .. attribute:: neuron_reconstruction_id
      

      

   .. attribute:: specimen_id
      

      

   .. attribute:: primary_boundaries
      

      

   .. attribute:: swc_file
      

      

   .. attribute:: cell_depth
      

      

   .. attribute:: cut_thickness
      

      

   .. attribute:: marker_file
      

      

   .. attribute:: ccf_soma_xyz
      

      

   .. attribute:: slice_transform
      

      

   .. attribute:: slice_image_flip