neuron_morphology.transforms.pia_wm_streamlines.calculate_pia_wm_streamlines

Module Contents

Functions

convert_path_str_to_list(path_str: str, resolution: float = 1.0) → List[Tuple[float, float]]
run_streamlines(pia_path_str: str, wm_path_str: str, resolution: float, soma_path_str: Optional[str] = None, mesh_res: int = 20, pia_fixed_value: float = 1.0, wm_fixed_value: float = 0.0)
main()

neuron_morphology.transforms.pia_wm_streamlines.calculate_pia_wm_streamlines.convert_path_str_to_list(path_str: str, resolution: float = 1.0) → List[Tuple[float, float]]

neuron_morphology.transforms.pia_wm_streamlines.calculate_pia_wm_streamlines.run_streamlines(pia_path_str: str, wm_path_str: str, resolution: float, soma_path_str: Optional[str] = None, mesh_res: int = 20, pia_fixed_value: float = 1.0, wm_fixed_value: float = 0.0)

neuron_morphology.transforms.pia_wm_streamlines.calculate_pia_wm_streamlines.main()