neuron_morphology.transforms.tilt_correction._schemas

Module Contents

Classes

InputParameters	The base marshmallow schema used by ArgSchemaParser to identify
OutputParameters	mm.Schema class with support for making fields default to

Functions

validate_input_affine(data)

neuron_morphology.transforms.tilt_correction._schemas.validate_input_affine(data)

class neuron_morphology.transforms.tilt_correction._schemas.InputParameters(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.ArgSchema

The base marshmallow schema used by ArgSchemaParser to identify input_json and output_json files and the log_level

swc_path

marker_path

slice_image_flip

ccf_soma_location

slice_transform_list

slice_transform_dict

ccf_path

validate_schema_input(self, data, **kwargs)

class neuron_morphology.transforms.tilt_correction._schemas.OutputParameters(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.DefaultSchema

mm.Schema class with support for making fields default to values defined by that field’s arguments.

inputs

tilt_correction

tilt_transform_dict