neuron_morphology.layered_point_depths._schemas

Module Contents

Classes

DepthField	mm.Schema class with support for making fields default to
Layer	mm.Schema class with support for making fields default to
InputParameters	The base marshmallow schema used by ArgSchemaParser to identify
OutputParameters	mm.Schema class with support for making fields default to

class neuron_morphology.layered_point_depths._schemas.DepthField(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.DefaultSchema

mm.Schema class with support for making fields default to values defined by that field’s arguments.

gradient_field_path

depth_field_path

soma_origin

pia_sign

class neuron_morphology.layered_point_depths._schemas.Layer(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.DefaultSchema

mm.Schema class with support for making fields default to values defined by that field’s arguments.

name

bounds

pia_surface

wm_surface

class neuron_morphology.layered_point_depths._schemas.InputParameters(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.ArgSchema

The base marshmallow schema used by ArgSchemaParser to identify input_json and output_json files and the log_level

swc_path

depth

layers

step_size

output_path

max_iter

class neuron_morphology.layered_point_depths._schemas.OutputParameters(only=None, exclude=(), many=False, context=None, load_only=(), dump_only=(), partial=False, unknown=None)

Bases: argschema.schemas.DefaultSchema

mm.Schema class with support for making fields default to values defined by that field’s arguments.

inputs

output_path