neuron_morphology.snap_polygons.__main__

An executable for finding close-fit boundaries between cortical layer polygons.

Module Contents

Functions

run_snap_polygons(layer_polygons, pia_surface, wm_surface, layer_order, working_scale: float, surface_distance_threshold: float, multipolygon_error_threshold: float, images=None)	Finds and returns close fit boundaries. May write diagnostic images as
main()	CLI entrypoint for snapping polygons

neuron_morphology.snap_polygons.__main__.run_snap_polygons(layer_polygons, pia_surface, wm_surface, layer_order, working_scale: float, surface_distance_threshold: float, multipolygon_error_threshold: float, images=None)

Finds and returns close fit boundaries. May write diagnostic images as a side effect.

neuron_morphology.snap_polygons.__main__.main()

CLI entrypoint for snapping polygons