neuron_morphology.feature_extractor.feature_specialization module

class neuron_morphology.feature_extractor.feature_specialization.AllNeuriteCompareSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types_to_compare': None}

marks = {<class 'neuron_morphology.feature_extractor.mark.AllNeuriteTypes'>}

name = 'all_neurites'

class neuron_morphology.feature_extractor.feature_specialization.AllNeuriteSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types': None}

marks = {<class 'neuron_morphology.feature_extractor.mark.AllNeuriteTypes'>}

name = 'all_neurites'

class neuron_morphology.feature_extractor.feature_specialization.ApicalDendriteCompareSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types_to_compare': [4]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresApical'>}

name = 'apical_dendrite'

class neuron_morphology.feature_extractor.feature_specialization.ApicalDendriteSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types': [4]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresApical'>}

name = 'apical_dendrite'

class neuron_morphology.feature_extractor.feature_specialization.AxonCompareSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types_to_compare': [2]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresAxon'>}

name = 'axon'

class neuron_morphology.feature_extractor.feature_specialization.AxonSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types': [2]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresAxon'>}

name = 'axon'

class neuron_morphology.feature_extractor.feature_specialization.BasalDendriteCompareSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types_to_compare': [3]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresBasal'>}

name = 'basal_dendrite'

class neuron_morphology.feature_extractor.feature_specialization.BasalDendriteSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types': [3]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresBasal'>}

name = 'basal_dendrite'

class neuron_morphology.feature_extractor.feature_specialization.DendriteCompareSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types_to_compare': [4, 3]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresDendrite'>}

name = 'dendrite'

class neuron_morphology.feature_extractor.feature_specialization.DendriteSpec

Bases: neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

kwargs = {'node_types': [4, 3]}

marks = {<class 'neuron_morphology.feature_extractor.mark.RequiresDendrite'>}

name = 'dendrite'

class neuron_morphology.feature_extractor.feature_specialization.FeatureSpecialization

Bases: object

Attributes:

kwargs

marks

name

Methods

factory(name, marks, kwargs, Any], …)

A utility for quickly generating feature specializations

classmethod factory(name: str, marks: Set[Type[neuron_morphology.feature_extractor.mark.Mark]], kwargs: Dict[str, Any], display_name: Union[str, NoneType] = None) → Type[~Fs]

A utility for quickly generating feature specializations

Parameters:

name : The name of the generated class. If display_name is not

provided, this will also be used as the name attribute of the generated class

marks : the marks which this specialization implies.

kwargs : the keyword argument values defining this specialization

display_name : if provided, the name attribute of the generated

specialization.

Returns:

A generated FeatureSpecialization subclass

kwargs

marks

name