neuron_morphology.validation.marker_validation module

neuron_morphology.validation.marker_validation.validate(marker_file, morphology)

neuron_morphology.validation.marker_validation.validate_coordinates_corresponding_to_axon_tip(marker_file, morphology)

This function checks whether the coordinates for each axon marker corresponds to a tip of a axon type in the related morphology

neuron_morphology.validation.marker_validation.validate_coordinates_corresponding_to_dendrite_tip(marker_file, morphology)

This function checks whether the coordinates for each dendrite marker corresponds to a tip of a dendrite type in the related morphology

neuron_morphology.validation.marker_validation.validate_expected_name(marker_file)

This function checks whether the markers have the expected types

neuron_morphology.validation.marker_validation.validate_no_reconstruction_count(marker_file)

This function checks whether there is exactly one type 20 in the file

neuron_morphology.validation.marker_validation.validate_type_thirty_count(marker_file)

This function checks whether there is exactly one type 30 in the file